Contacto
Campos de conocimiento
Bioingeniería
Ciencias Genómicas
Microbiología Molecular
Líneas de investigación
Biología de Sistemas y Sintética
Reducción del proteoma de bacteriano asistida por modelos a escala genómica
Estrategias de control de la expresion de ribosomas, crecimiento y producción
Producción de pigmentos bacterianos
Ingenieria de bacterias no modelo
Biosensores en sistemas libres de células
Publicaciones
27. Castillo-Alfonso, F., Valadez-Cano, C., Cejas-Añón, G., Utrilla, J., Alanis, J.C.S., Le Borgne, S., Sales-Cruz, A.M., Vigueras-Ramírez, G. and Olivares-Hernández, R., 2024. Sequencing, assembly, and genomic annotation of Leucoagaricus gongylophorus LEU18496, a dikarya mutualistic species. Molecular Omics, 20(8), pp.524-531.
26. Bedoya-Pérez, L.P., Aguilar-Vera, A., Sánchez-Pérez, M., Utrilla, J*. and Sohlenkamp, C., 2024. Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation. Applied Microbiology and Biotechnology, 108(1), p.288.
25. Bello-Gonzalez, M.A., Bedoya-Pérez, L.P., Utrilla, J*. 2024. Development of SynBio tools for Pseudomonas chlororaphis: a versatile non-pathogenic bacterium host. Accepted in: SynBio (MDPI). Corresponding author
24. Amaro-Reyes, A., Marcial-Ramírez, D., Vázquez-Landaverde, P.A., Utrilla, J., Escamilla-García, M., Regalado, C., Macias-Bobadilla, G., Campos-Guillén, J., Ramos-López, M.A. and Favela-Camacho, S.E., 2024. Electrostatic Fermentation: Molecular Response Insights for Tailored Beer Production. Foods, 13(4), p.600.
23. Lara, A. R., Utrilla, J., Martínez, L. M., Krausch, N., Kaspersetz, L., Hidalgo, D., Cruz‐Bournazou, N., Neubauer, P., Sigala, J.‐C., Gosset, G., & Büchs, J. (2024). Recombinant protein expression in proteome‐reduced cells under aerobic and oxygen‐limited regimes. Biotechnology and Bioengineering, 1–15.
22. Márquez‐Zavala, E. and Utrilla, J., 2023. Engineering resource allocation in artificially minimized cells: Is genome reduction the best strategy? Microbial Biotechnology, 16(5), pp.990-999.
21. Reyes-González, D., De Luna-Valenciano, H., Utrilla, J., Sieber, M., Peña-Miller, R., & Fuentes-Hernández, A. (2022). Dynamic proteome allocation regulates the profile of interaction of auxotrophic bacterial consortia. Royal Society Open Science, 9(5). https://doi.org/10.1098/RSOS.212008 (F.I. 2021: 3.656)
20. Hidalgo, D., Martínez-Ortiz, C. A., Palsson, B. O., Jiménez, J. I., & Utrilla, J*. (2022). Regulatory perturbations of ribosome allocation in bacteria reshape the growth proteome with a trade-off in adaptation capacity. iScience, 25(3), 103879. https://doi.org/10.1016/j.isci.2022.103879 Corresponding author (F.I. 2021: 6.107)
19. de la Cruz, M., Ramírez, E.A., Sigala, J.C., Utrilla, J. and Lara, A.R., 2020. Plasmid DNA Production in Proteome-Reduced Escherichia coli. Microorganisms, 8(9), p.1444. (F.I. 2021: 4.926)
18. Moreno-Avitia, F., Utrilla, J., Bolívar, F., Nogales, J. and Escalante, A., 2020. Metabolic reconstruction of Pseudomonas chlororaphis ATCC 9446 to understand its metabolic potential as a phenazine-1-carboxamide-producing strain. Applied Microbiology and Biotechnology, 104(23), pp.10119-10132. (F.I. 2021: 5.560)
17. Lastiri-Pancardo, G., Mercado-Hernández, J. S., Kim, J., Jiménez, J. I., & Utrilla, J. (2020). A quantitative method for proteome reallocation using minimal regulatory interventions. Nature Chemical Biology, 1–8. https://doi.org/10.1038/s41589-020-0593-y Corresponding author (F.I. 2021: 16.290)
16. Kim, J., Darlington, A., Salvador, M., Utrilla, J., & Jiménez, J. I. (2020). Trade-offs between gene expression, growth and phenotypic diversity in microbial populations. Current Opinion in Biotechnology, 62, 29–37. https://doi.org/10.1016/j.copbio.2019.08.004 (F.I. 2021: 10.279)
